BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C02SP1|AL428180
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig743 1578 0.0
>3x_Contig743
Length = 2201
Score = 1578 bits (793), Expect = 0.0
Identities = 805/811 (99%), Gaps = 1/811 (0%)
Strand = Plus / Plus
Query: 1 tagtcaaaccgcagagaacattgcacgttatataadacaatgaaagcacacaaccctgta 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 477 tagtcaaaccgcagagaacattgcacgttatataagacaatgaaagcacacaaccctgta 536
Query: 61 tatttctcattaaaatcgtatatattataawatkaatgtatatctgtgtcaaaacttcag 120
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 537 tatttctcattaaaatcgtatatattataaaatgaatgtatatctgtgtcaaaacttcag 596
Query: 121 ctataaataccttggtcaaatcctgaagcaatgggtctcgcaccgtaaacgcctttccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctataaataccttggtcaaatcctgaagcaatgggtctcgcaccgtaaacgcctttccaa 656
Query: 181 gatacaggagcagtcaaccgtccctggattaagtcttggatcaactctgccaacttttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gatacaggagcagtcaaccgtccctggattaagtcttggatcaactctgccaacttttcg 716
Query: 241 catatttggaaggcatcccaagagttatctccttcatgaaccactttgctgagataagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 catatttggaaggcatcccaagagttatctccttcatgaaccactttgctgagataagta 776
Query: 301 attgatttgaggttcaaatcggactgatacaacaaatgatggaataacttgaacaccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 attgatttgaggttcaaatcggactgatacaacaaatgatggaataacttgaacaccggt 836
Query: 361 tgatcggcagaaaaattctgctggaaactggccgtatcaaaatggaacacttgattcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tgatcggcagaaaaattctgctggaaactggccgtatcaaaatggaacacttgattcact 896
Query: 421 atagagtgttcatcgtcctgtatcgacaatctggtctggaattgtaatgtgatattatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 atagagtgttcatcgtcctgtatcgacaatctggtctggaattgtaatgtgatattatca 956
Query: 481 agggattccaattgacatttggctgtggcatattgatgttgatagttcgcattcgaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 agggattccaattgacatttggctgtggcatattgatgttgatagttcgcattcgaaaat 1016
Query: 541 ggtacactgggggtccagagctcctgcagaatccaacacaatgacagattcaatgccgta 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 ggtacact-ggggtccagagctcctgcagaatccaacacaatgacagattcaatgccgta 1075
Query: 601 cgacttgatcagtggtattataacctctttaaagaactggttctcgtacccggcaatgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 cgacttgatcagtggtattataacctctttaaagaactggttctcgtacccggcaatgac 1135
Query: 661 tggtgatctctgctgaataacatacaaatccaatcttctgttatagaataactctaacgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 tggtgatctctgctgaataacatacaaatccaatcttctgttatagaataactctaacgg 1195
Query: 721 agtagtaaattgtttcttaraccctttacaatcatggtacaaaggktttgagctaccttc 780
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1196 agtagtaaattgtttcttagaccctttacaatcatggtacaaaggttttgagctaccttc 1255
Query: 781 cacgaaatccaacggtccaataaaggagtga 811
|||||||||||||||||||||||||||||||
Sbjct: 1256 cacgaaatccaacggtccaataaaggagtga 1286
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5186
Number of Sequences: 1807
Number of extensions: 5186
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)